XFDRAlgorithm

class pyopenms.XFDRAlgorithm

Bases: object

Cython implementation of _XFDRAlgorithm

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1XFDRAlgorithm.html

– Inherits from [‘DefaultParamHandler’]

__init__()

• Cython signature: void XFDRAlgorithm()

• Cython signature: void XFDRAlgorithm(XFDRAlgorithm &)

Methods

__init__	Cython signature: void XFDRAlgorithm()
getDefaults	Cython signature: Param getDefaults() Returns the default parameters
getName	Cython signature: String getName() Returns the name
getParameters	Cython signature: Param getParameters() Returns the parameters
getSubsections	Cython signature: libcpp_vector[String] getSubsections()
run	Cython signature: XFDRAlgorithm_ExitCodes run(libcpp_vector[PeptideIdentification] & peptide_ids, ProteinIdentification & protein_id)
setName	Cython signature: void setName(const String &) Sets the name
setParameters	Cython signature: void setParameters(Param & param) Sets the parameters
validateClassArguments	Cython signature: XFDRAlgorithm_ExitCodes validateClassArguments()

XFDRAlgorithm_ExitCodes

alias of pyopenms.pyopenms_4.__XFDRAlgorithm_ExitCodes

getDefaults()

Cython signature: Param getDefaults() Returns the default parameters

getName()

Cython signature: String getName() Returns the name

getParameters()

Cython signature: Param getParameters() Returns the parameters

getSubsections()

Cython signature: libcpp_vector[String] getSubsections()

run()

Cython signature: XFDRAlgorithm_ExitCodes run(libcpp_vector[PeptideIdentification] & peptide_ids, ProteinIdentification & protein_id)

setName()

Cython signature: void setName(const String &) Sets the name

setParameters()

Cython signature: void setParameters(Param & param) Sets the parameters

validateClassArguments()

Cython signature: XFDRAlgorithm_ExitCodes validateClassArguments()