SiriusMzTabWriter

class pyopenms.SiriusMzTabWriter

Bases: object

Cython implementation of _SiriusMzTabWriter

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1SiriusMzTabWriter.html

__init__()

• Cython signature: void SiriusMzTabWriter()

• Cython signature: void SiriusMzTabWriter(SiriusMzTabWriter &)

Methods

__init__	Cython signature: void SiriusMzTabWriter()
extractFeatureId	Cython signature: String extractFeatureId(const String & path)
extractScanIndex	Cython signature: int extractScanIndex(const String & path)
extractScanNumber	Cython signature: int extractScanNumber(const String & path)
extractSpectrumMSInfo	Cython signature: SiriusMzTabWriter_SiriusSpectrumMSInfo extractSpectrumMSInfo(const String & single_sirius_path)
extract_columnname_to_columnindex	Cython signature: libcpp_map[libcpp_string,size_t] extract_columnname_to_columnindex(CsvFile & csvfile)
read	Cython signature: void read(libcpp_vector[String] & sirius_output_paths, const String & original_input_mzml, size_t top_n_hits, MzTab & result)

extractFeatureId()

Cython signature: String extractFeatureId(const String & path)

extractScanIndex()

Cython signature: int extractScanIndex(const String & path)

extractScanNumber()

Cython signature: int extractScanNumber(const String & path)

extractSpectrumMSInfo()

Cython signature: SiriusMzTabWriter_SiriusSpectrumMSInfo extractSpectrumMSInfo(const String & single_sirius_path)

extract_columnname_to_columnindex()

Cython signature: libcpp_map[libcpp_string,size_t] extract_columnname_to_columnindex(CsvFile & csvfile)

read()

Cython signature: void read(libcpp_vector[String] & sirius_output_paths, const String & original_input_mzml, size_t top_n_hits, MzTab & result)