SpectrumAccessOpenMSCached
- class pyopenms.SpectrumAccessOpenMSCached
Bases:
objectCython implementation of _SpectrumAccessOpenMSCached
- Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1SpectrumAccessOpenMSCached.html
– Inherits from [‘ISpectrumAccess’]
- __init__()
Cython signature: void SpectrumAccessOpenMSCached()
Cython signature: void SpectrumAccessOpenMSCached(String filename)
This class implements the OpenSWATH Spectrum Access interface (ISpectrumAccess) using the CachedmzML class which is able to read and write a cached mzML file
Cython signature: void SpectrumAccessOpenMSCached(SpectrumAccessOpenMSCached &)
Methods
Cython signature: void SpectrumAccessOpenMSCached()
Cython signature: shared_ptr[OSChromatogram] getChromatogramById(int id_) Returns a pointer to a chromatogram at the given id
Cython signature: libcpp_utf8_output_string getChromatogramNativeID(int id_)
Cython signature: size_t getNrChromatograms() Returns the number of chromatograms available
Cython signature: size_t getNrSpectra() Returns the number of spectra available
Cython signature: libcpp_vector[size_t] getSpectraByRT(double RT, double deltaRT) Returns a vector of ids of spectra that are within RT +/- deltaRT
Cython signature: shared_ptr[OSSpectrum] getSpectrumById(int id_) Returns a pointer to a spectrum at the given string id
- getChromatogramById()
Cython signature: shared_ptr[OSChromatogram] getChromatogramById(int id_) Returns a pointer to a chromatogram at the given id
- getChromatogramNativeID()
Cython signature: libcpp_utf8_output_string getChromatogramNativeID(int id_)
- getNrChromatograms()
Cython signature: size_t getNrChromatograms() Returns the number of chromatograms available
- getNrSpectra()
Cython signature: size_t getNrSpectra() Returns the number of spectra available
- getSpectraByRT()
Cython signature: libcpp_vector[size_t] getSpectraByRT(double RT, double deltaRT) Returns a vector of ids of spectra that are within RT +/- deltaRT