SpectraMerger

class pyopenms.SpectraMerger

Bases: object

Cython implementation of _SpectraMerger

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1SpectraMerger.html

– Inherits from [‘DefaultParamHandler’]

__init__()

• Cython signature: void SpectraMerger() Merges blocks of MS or MS2 spectra

• Cython signature: void SpectraMerger(SpectraMerger &)

Methods

__init__	Cython signature: void SpectraMerger()
average	Cython signature: void average(MSExperiment & exp, String average_type)
getDefaults	Cython signature: Param getDefaults() Returns the default parameters
getName	Cython signature: String getName() Returns the name
getParameters	Cython signature: Param getParameters() Returns the parameters
getSubsections	Cython signature: libcpp_vector[String] getSubsections()
mergeSpectraBlockWise	Cython signature: void mergeSpectraBlockWise(MSExperiment & exp)
mergeSpectraPrecursors	Cython signature: void mergeSpectraPrecursors(MSExperiment & exp) Merges spectra with similar precursors (must have MS2 level)
setName	Cython signature: void setName(const String &) Sets the name
setParameters	Cython signature: void setParameters(Param & param) Sets the parameters

average()

Cython signature: void average(MSExperiment & exp, String average_type)

Parameters

• exp – Experimental data to be averaged

• average_type – Averaging type to be used (“gaussian” or “tophat”)

getDefaults()

Cython signature: Param getDefaults() Returns the default parameters

getName()

Cython signature: String getName() Returns the name

getParameters()

Cython signature: Param getParameters() Returns the parameters

getSubsections()

Cython signature: libcpp_vector[String] getSubsections()

mergeSpectraBlockWise()

Cython signature: void mergeSpectraBlockWise(MSExperiment & exp)

mergeSpectraPrecursors()

Cython signature: void mergeSpectraPrecursors(MSExperiment & exp) Merges spectra with similar precursors (must have MS2 level)

setName()

Cython signature: void setName(const String &) Sets the name

setParameters()

Cython signature: void setParameters(Param & param) Sets the parameters