SqMassFile

class pyopenms.SqMassFile

Bases: object

Cython implementation of _SqMassFile

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1SqMassFile.html

This class provides functions to read and write spectra and chromatograms to disk using a SQLite database and store them in sqMass format. This allows users to access, select and filter spectra and chromatograms on-demand even in a large collection of data

__init__()

• Cython signature: void SqMassFile()

• Cython signature: void SqMassFile(SqMassFile &)

Methods

__init__	Cython signature: void SqMassFile()
load	Cython signature: void load(const String & filename, MSExperiment & map_) Read / Write a complete mass spectrometric experiment
setConfig	Cython signature: void setConfig(SqMassConfig config)
store	Cython signature: void store(const String & filename, MSExperiment & map_) Store an MSExperiment in sqMass format

load()

Cython signature: void load(const String & filename, MSExperiment & map_) Read / Write a complete mass spectrometric experiment

setConfig()

Cython signature: void setConfig(SqMassConfig config)

store()

Cython signature: void store(const String & filename, MSExperiment & map_) Store an MSExperiment in sqMass format