MRMTransitionGroupCP

class pyopenms.MRMTransitionGroupCP

Bases: object

Cython implementation of _MRMTransitionGroup[_MSChromatogram,_ReactionMonitoringTransition]

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1MRMTransitionGroup[_MSChromatogram,_ReactionMonitoringTransition].html

__init__()

• Cython signature: void MRMTransitionGroupCP()

• Cython signature: void MRMTransitionGroupCP(MRMTransitionGroupCP &)

Methods

__init__	Cython signature: void MRMTransitionGroupCP()
addChromatogram	Cython signature: void addChromatogram(MSChromatogram chromatogram, String key)
addFeature	Cython signature: void addFeature(MRMFeature feature)
addPrecursorChromatogram	Cython signature: void addPrecursorChromatogram(MSChromatogram chromatogram, String key)
addTransition	Cython signature: void addTransition(ReactionMonitoringTransition transition, String key)
chromatogramIdsMatch	Cython signature: bool chromatogramIdsMatch()
getBestFeature	Cython signature: MRMFeature getBestFeature()
getChromatogram	Cython signature: MSChromatogram getChromatogram(String key)
getChromatograms	Cython signature: libcpp_vector[MSChromatogram] getChromatograms()
getFeatures	Cython signature: libcpp_vector[MRMFeature] getFeatures()
getFeaturesMuteable	Cython signature: libcpp_vector[MRMFeature] getFeaturesMuteable()
getLibraryIntensity	Cython signature: void getLibraryIntensity(libcpp_vector[double] result)
getPrecursorChromatogram	Cython signature: MSChromatogram getPrecursorChromatogram(String key)
getPrecursorChromatograms	Cython signature: libcpp_vector[MSChromatogram] getPrecursorChromatograms()
getTransition	Cython signature: ReactionMonitoringTransition getTransition(String key)
getTransitionGroupID	Cython signature: String getTransitionGroupID()
getTransitions	Cython signature: libcpp_vector[ReactionMonitoringTransition] getTransitions()
getTransitionsMuteable	Cython signature: libcpp_vector[ReactionMonitoringTransition] getTransitionsMuteable()
hasChromatogram	Cython signature: bool hasChromatogram(String key)
hasPrecursorChromatogram	Cython signature: bool hasPrecursorChromatogram(String key)
hasTransition	Cython signature: bool hasTransition(String key)
isInternallyConsistent	Cython signature: bool isInternallyConsistent()
setTransitionGroupID	Cython signature: void setTransitionGroupID(String tr_gr_id)
size	Cython signature: size_t size()
subset	Cython signature: MRMTransitionGroupCP subset(libcpp_vector[libcpp_utf8_string] tr_ids)

addChromatogram()

Cython signature: void addChromatogram(MSChromatogram chromatogram, String key)

addFeature()

Cython signature: void addFeature(MRMFeature feature)

addPrecursorChromatogram()

Cython signature: void addPrecursorChromatogram(MSChromatogram chromatogram, String key)

addTransition()

Cython signature: void addTransition(ReactionMonitoringTransition transition, String key)

chromatogramIdsMatch()

Cython signature: bool chromatogramIdsMatch()

getBestFeature()

Cython signature: MRMFeature getBestFeature()

getChromatogram()

Cython signature: MSChromatogram getChromatogram(String key)

getChromatograms()

Cython signature: libcpp_vector[MSChromatogram] getChromatograms()

getFeatures()

Cython signature: libcpp_vector[MRMFeature] getFeatures()

getFeaturesMuteable()

Cython signature: libcpp_vector[MRMFeature] getFeaturesMuteable()

getLibraryIntensity()

Cython signature: void getLibraryIntensity(libcpp_vector[double] result)

getPrecursorChromatogram()

Cython signature: MSChromatogram getPrecursorChromatogram(String key)

getPrecursorChromatograms()

Cython signature: libcpp_vector[MSChromatogram] getPrecursorChromatograms()

getTransition()

Cython signature: ReactionMonitoringTransition getTransition(String key)

getTransitionGroupID()

Cython signature: String getTransitionGroupID()

getTransitions()

Cython signature: libcpp_vector[ReactionMonitoringTransition] getTransitions()

getTransitionsMuteable()

Cython signature: libcpp_vector[ReactionMonitoringTransition] getTransitionsMuteable()

hasChromatogram()

Cython signature: bool hasChromatogram(String key)

hasPrecursorChromatogram()

Cython signature: bool hasPrecursorChromatogram(String key)

hasTransition()

Cython signature: bool hasTransition(String key)

isInternallyConsistent()

Cython signature: bool isInternallyConsistent()

setTransitionGroupID()

Cython signature: void setTransitionGroupID(String tr_gr_id)

size()

Cython signature: size_t size()

subset()

Cython signature: MRMTransitionGroupCP subset(libcpp_vector[libcpp_utf8_string] tr_ids)