MSDataSqlConsumer

class pyopenms.MSDataSqlConsumer

Bases: object

Cython implementation of _MSDataSqlConsumer

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1MSDataSqlConsumer.html

__init__()

• Cython signature: void MSDataSqlConsumer(String filename, uint64_t run_id, int buffer_size, bool full_meta, bool lossy_compression, double linear_mass_acc)

• Cython signature: void MSDataSqlConsumer(MSDataSqlConsumer &)

Methods

__init__	Cython signature: void MSDataSqlConsumer(String filename, uint64_t run_id, int buffer_size, bool full_meta, bool lossy_compression, double linear_mass_acc)
consumeChromatogram	Cython signature: void consumeChromatogram(MSChromatogram & c) Write a chromatogram to the output file
consumeSpectrum	Cython signature: void consumeSpectrum(MSSpectrum & s) Write a spectrum to the output file
flush	Cython signature: void flush()
setExpectedSize	Cython signature: void setExpectedSize(size_t expectedSpectra, size_t expectedChromatograms)
setExperimentalSettings	Cython signature: void setExperimentalSettings(ExperimentalSettings & exp)

consumeChromatogram()

Cython signature: void consumeChromatogram(MSChromatogram & c) Write a chromatogram to the output file

consumeSpectrum()

Cython signature: void consumeSpectrum(MSSpectrum & s) Write a spectrum to the output file

flush()

Cython signature: void flush()

After calling this function, no more data is held in the buffer but the class is still able to receive new data

setExpectedSize()

Cython signature: void setExpectedSize(size_t expectedSpectra, size_t expectedChromatograms)

setExperimentalSettings()

Cython signature: void setExperimentalSettings(ExperimentalSettings & exp)