SearchParameters

class pyopenms.SearchParameters

Bases: object

Cython implementation of _SearchParameters

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1SearchParameters.html

– Inherits from [‘MetaInfoInterface’]

__init__()

• Cython signature: void SearchParameters()

• Cython signature: void SearchParameters(SearchParameters &)

Methods

__init__	Cython signature: void SearchParameters()
clearMetaInfo	Cython signature: void clearMetaInfo() Removes all meta values
getKeys	Cython signature: void getKeys(libcpp_vector[String] & keys) Fills the given vector with a list of all keys for which a value is set
getMetaValue	Cython signature: DataValue getMetaValue(String) Returns the value corresponding to a string, or
isMetaEmpty	Cython signature: bool isMetaEmpty() Returns if the MetaInfo is empty
metaRegistry	Cython signature: MetaInfoRegistry metaRegistry() Returns a reference to the MetaInfoRegistry
metaValueExists	Cython signature: bool metaValueExists(String) Returns whether an entry with the given name exists
removeMetaValue	Cython signature: void removeMetaValue(String) Removes the DataValue corresponding to name if it exists
setMetaValue	Cython signature: void setMetaValue(String, DataValue) Sets the DataValue corresponding to a name

Attributes

charges
db
db_version
digestion_enzyme
fixed_modifications
fragment_mass_tolerance
fragment_mass_tolerance_ppm
mass_type
missed_cleavages
precursor_mass_tolerance
precursor_mass_tolerance_ppm
taxonomy
variable_modifications

charges

clearMetaInfo()

Cython signature: void clearMetaInfo() Removes all meta values

db

db_version

digestion_enzyme

fixed_modifications

fragment_mass_tolerance

fragment_mass_tolerance_ppm

getKeys()

Cython signature: void getKeys(libcpp_vector[String] & keys) Fills the given vector with a list of all keys for which a value is set

getMetaValue()

Cython signature: DataValue getMetaValue(String) Returns the value corresponding to a string, or

isMetaEmpty()

Cython signature: bool isMetaEmpty() Returns if the MetaInfo is empty

mass_type

metaRegistry()

Cython signature: MetaInfoRegistry metaRegistry() Returns a reference to the MetaInfoRegistry

metaValueExists()

Cython signature: bool metaValueExists(String) Returns whether an entry with the given name exists

missed_cleavages

precursor_mass_tolerance

precursor_mass_tolerance_ppm

removeMetaValue()

Cython signature: void removeMetaValue(String) Removes the DataValue corresponding to name if it exists

setMetaValue()

Cython signature: void setMetaValue(String, DataValue) Sets the DataValue corresponding to a name

taxonomy

variable_modifications