LibSVMEncoder

class pyopenms.LibSVMEncoder

Bases: object

Cython implementation of _LibSVMEncoder

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1LibSVMEncoder.html

The class can be used to construct composition vectors for sequences. Additionally the vectors can be encoded into the libsvm format

__init__()

• Cython signature: void LibSVMEncoder()

• Cython signature: void LibSVMEncoder(LibSVMEncoder &)

Methods

__init__	Cython signature: void LibSVMEncoder()
predictPeptideRT	Cython signature: libcpp_vector[double] predictPeptideRT(libcpp_vector[String] sequences, const SVMWrapper & svm, const String & allowed_characters, unsigned int maximum_sequence_length)

predictPeptideRT()

Cython signature: libcpp_vector[double] predictPeptideRT(libcpp_vector[String] sequences, const SVMWrapper & svm, const String & allowed_characters, unsigned int maximum_sequence_length)