GaussFilter

class pyopenms.GaussFilter

Bases: object

Cython implementation of _GaussFilter

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1GaussFilter.html

– Inherits from [‘DefaultParamHandler’, ‘ProgressLogger’]

__init__()

  • Cython signature: void GaussFilter() This class represents a Gaussian lowpass-filter which works on uniform as well as on non-uniform profile data

  • Cython signature: void GaussFilter(GaussFilter &)

Methods

__init__

  • Cython signature: void GaussFilter()

endProgress

Cython signature: void endProgress() Ends the progress display

filter

  • Cython signature: void filter(MSSpectrum & spectrum)

filterExperiment

Cython signature: void filterExperiment(MSExperiment & exp) Smoothes an MSExperiment containing profile data

getDefaults

Cython signature: Param getDefaults() Returns the default parameters

getLogType

Cython signature: LogType getLogType() Returns the type of progress log being used

getName

Cython signature: String getName() Returns the name

getParameters

Cython signature: Param getParameters() Returns the parameters

getSubsections

Cython signature: libcpp_vector[String] getSubsections()

nextProgress

Cython signature: void nextProgress() Increment progress by 1 (according to range begin-end)

setLogType

Cython signature: void setLogType(LogType) Sets the progress log that should be used.

setName

Cython signature: void setName(const String &) Sets the name

setParameters

Cython signature: void setParameters(Param & param) Sets the parameters

setProgress

Cython signature: void setProgress(ptrdiff_t value) Sets the current progress

startProgress

Cython signature: void startProgress(ptrdiff_t begin, ptrdiff_t end, String label)
endProgress()

Cython signature: void endProgress() Ends the progress display

filter()

  • Cython signature: void filter(MSSpectrum & spectrum) Smoothes an MSSpectrum containing profile data

  • Cython signature: void filter(MSChromatogram & chromatogram)

filterExperiment()

Cython signature: void filterExperiment(MSExperiment & exp) Smoothes an MSExperiment containing profile data

getDefaults()

Cython signature: Param getDefaults() Returns the default parameters

getLogType()

Cython signature: LogType getLogType() Returns the type of progress log being used

getName()

Cython signature: String getName() Returns the name

getParameters()

Cython signature: Param getParameters() Returns the parameters

getSubsections()

Cython signature: libcpp_vector[String] getSubsections()

nextProgress()

Cython signature: void nextProgress() Increment progress by 1 (according to range begin-end)

setLogType()

Cython signature: void setLogType(LogType) Sets the progress log that should be used. The default type is NONE!

setName()

Cython signature: void setName(const String &) Sets the name

setParameters()

Cython signature: void setParameters(Param & param) Sets the parameters

setProgress()

Cython signature: void setProgress(ptrdiff_t value) Sets the current progress

startProgress()

Cython signature: void startProgress(ptrdiff_t begin, ptrdiff_t end, String label)