CompNovoIdentificationCID

class pyopenms.CompNovoIdentificationCID

Bases: object

Cython implementation of _CompNovoIdentificationCID

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1CompNovoIdentificationCID.html

– Inherits from [‘DefaultParamHandler’]

__init__()
  • Cython signature: void CompNovoIdentificationCID()

  • Cython signature: void CompNovoIdentificationCID(CompNovoIdentificationCID &)

Methods

__init__

  • Cython signature: void CompNovoIdentificationCID()

getDefaults

Cython signature: Param getDefaults() Returns the default parameters

getIdentification

Cython signature: void getIdentification(PeptideIdentification & id, MSSpectrum cid_spec) Performs and returns de novo identifications

getIdentifications

Cython signature: void getIdentifications(libcpp_vector[PeptideIdentification] & ids, MSExperiment) Performs and returns de novo identifications

getName

Cython signature: String getName() Returns the name

getParameters

Cython signature: Param getParameters() Returns the parameters

getSubsections

Cython signature: libcpp_vector[String] getSubsections()

setName

Cython signature: void setName(const String &) Sets the name

setParameters

Cython signature: void setParameters(Param & param) Sets the parameters

getDefaults()

Cython signature: Param getDefaults() Returns the default parameters

getIdentification()

Cython signature: void getIdentification(PeptideIdentification & id, MSSpectrum cid_spec) Performs and returns de novo identifications

getIdentifications()

Cython signature: void getIdentifications(libcpp_vector[PeptideIdentification] & ids, MSExperiment) Performs and returns de novo identifications

getName()

Cython signature: String getName() Returns the name

getParameters()

Cython signature: Param getParameters() Returns the parameters

getSubsections()

Cython signature: libcpp_vector[String] getSubsections()

setName()

Cython signature: void setName(const String &) Sets the name

setParameters()

Cython signature: void setParameters(Param & param) Sets the parameters