GaussTraceFitter

class pyopenms.GaussTraceFitter

Bases: object

Cython implementation of _GaussTraceFitter

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1GaussTraceFitter.html

__init__()

• Cython signature: void GaussTraceFitter() Fitter for RT profiles using a Gaussian background model

• Cython signature: void GaussTraceFitter(GaussTraceFitter &)

Methods

__init__	Cython signature: void GaussTraceFitter()
checkMaximalRTSpan	Cython signature: bool checkMaximalRTSpan(double max_rt_span)
checkMinimalRTSpan	Cython signature: bool checkMinimalRTSpan(libcpp_pair[double,double] & rt_bounds, double min_rt_span)
computeTheoretical	Cython signature: double computeTheoretical(MassTrace & trace, size_t k)
fit	Cython signature: void fit(MassTraces & traces) Override important methods
getArea	Cython signature: double getArea() Returns area of the fitted gaussian model
getCenter	Cython signature: double getCenter() Returns center of the fitted gaussian model
getFWHM	Cython signature: double getFWHM() Returns FWHM of the fitted gaussian model
getGnuplotFormula	Cython signature: String getGnuplotFormula(MassTrace & trace, char function_name, double baseline, double rt_shift)
getHeight	Cython signature: double getHeight() Returns height of the fitted gaussian model
getLowerRTBound	Cython signature: double getLowerRTBound() Returns the lower RT bound
getSigma	Cython signature: double getSigma() Returns Sigma of the fitted gaussian model
getUpperRTBound	Cython signature: double getUpperRTBound() Returns the upper RT bound
getValue	Cython signature: double getValue(double rt) Returns value of the fitted gaussian model

checkMaximalRTSpan()

Cython signature: bool checkMaximalRTSpan(double max_rt_span)

checkMinimalRTSpan()

Cython signature: bool checkMinimalRTSpan(libcpp_pair[double,double] & rt_bounds, double min_rt_span)

computeTheoretical()

Cython signature: double computeTheoretical(MassTrace & trace, size_t k)

fit()

Cython signature: void fit(MassTraces & traces) Override important methods

getArea()

Cython signature: double getArea() Returns area of the fitted gaussian model

getCenter()

Cython signature: double getCenter() Returns center of the fitted gaussian model

getFWHM()

Cython signature: double getFWHM() Returns FWHM of the fitted gaussian model

getGnuplotFormula()

Cython signature: String getGnuplotFormula(MassTrace & trace, char function_name, double baseline, double rt_shift)

getHeight()

Cython signature: double getHeight() Returns height of the fitted gaussian model

getLowerRTBound()

Cython signature: double getLowerRTBound() Returns the lower RT bound

getSigma()

Cython signature: double getSigma() Returns Sigma of the fitted gaussian model

getUpperRTBound()

Cython signature: double getUpperRTBound() Returns the upper RT bound

getValue()

Cython signature: double getValue(double rt) Returns value of the fitted gaussian model