ChromatogramExtractor

class pyopenms.ChromatogramExtractor

Bases: object

Cython implementation of _ChromatogramExtractor

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1ChromatogramExtractor.html: – Inherits from [‘ProgressLogger’]

__init__()

Methods

`__init__`	Cython signature: void ChromatogramExtractor()
`endProgress`	Cython signature: void endProgress() Ends the progress display
`extractChromatograms`	Cython signature: void extractChromatograms(MSExperiment & input, MSExperiment & output, TargetedExperiment & transition_exp, double extract_window, bool ppm, TransformationDescription trafo, double rt_extraction_window, String filter) Extract chromatograms at the m/z and RT defined by the ExtractionCoordinates
`getLogType`	Cython signature: LogType getLogType() Returns the type of progress log being used
`nextProgress`	Cython signature: void nextProgress() Increment progress by 1 (according to range begin-end)
`setLogType`	Cython signature: void setLogType(LogType) Sets the progress log that should be used.
`setProgress`	Cython signature: void setProgress(ptrdiff_t value) Sets the current progress
`startProgress`	Cython signature: void startProgress(ptrdiff_t begin, ptrdiff_t end, String label)

endProgress(): Cython signature: void endProgress() Ends the progress display

extractChromatograms(): Cython signature: void extractChromatograms(MSExperiment & input, MSExperiment & output, TargetedExperiment & transition_exp, double extract_window, bool ppm, TransformationDescription trafo, double rt_extraction_window, String filter) Extract chromatograms at the m/z and RT defined by the ExtractionCoordinates

getLogType(): Cython signature: LogType getLogType() Returns the type of progress log being used

nextProgress(): Cython signature: void nextProgress() Increment progress by 1 (according to range begin-end)

setLogType(): Cython signature: void setLogType(LogType) Sets the progress log that should be used. The default type is NONE!

setProgress(): Cython signature: void setProgress(ptrdiff_t value) Sets the current progress

startProgress(): Cython signature: void startProgress(ptrdiff_t begin, ptrdiff_t end, String label)