IndexedMzMLFileLoader

class pyopenms.IndexedMzMLFileLoader

Bases: object

Cython implementation of _IndexedMzMLFileLoader

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1IndexedMzMLFileLoader.html

__init__()

Cython signature: void IndexedMzMLFileLoader() A class to load an indexedmzML file

Methods

__init__	Cython signature: void IndexedMzMLFileLoader() A class to load an indexedmzML file
getOptions	Cython signature: PeakFileOptions getOptions() Returns the options for loading/storing
load	Cython signature: bool load(String, OnDiscMSExperiment &)
setOptions	Cython signature: void setOptions(PeakFileOptions) Returns the options for loading/storing
store	Cython signature: void store(String, OnDiscMSExperiment &)

getOptions()

Cython signature: PeakFileOptions getOptions() Returns the options for loading/storing

load()

Cython signature: bool load(String, OnDiscMSExperiment &)

Parameters

• filename – Filename determines where the file is located

• exp – Object which will contain the data after the call

Returns

Indicates whether parsing was successful (if it is false, the file most likely was not an mzML or not indexed)

setOptions()

Cython signature: void setOptions(PeakFileOptions) Returns the options for loading/storing

store()

• Cython signature: void store(String, OnDiscMSExperiment &)

Parameters

• filename – Filename determines where the file will be stored

• exp – MS data to be stored - Cython signature: void store(String, MSExperiment &)

Parameters

• filename – Filename determines where the file will be stored

• exp – MS data to be stored