StablePairFinder#

class pyopenms.StablePairFinder#

Bases: object

Cython implementation of _StablePairFinder

Original C++ documentation is available here: – Inherits from [‘BaseGroupFinder’]

__init__(self) → None#

Methods

`__init__`(self)
`endProgress`(self)	Ends the progress display
`getDefaults`(self)	Returns the default parameters
`getLogType`(self)	Returns the type of progress log being used
`getName`(self)	Returns the name
`getParameters`(self)	Returns the parameters
`getProductName`(self)
`getSubsections`(self)
`nextProgress`(self)	Increment progress by 1 (according to range begin-end)
`registerChildren`(self)	Register all derived classes here
`run`(self, input_maps, result_map)
`setLogType`(self, in_0)	Sets the progress log that should be used.
`setName`(self, in_0)	Sets the name
`setParameters`(self, param)	Sets the parameters
`setProgress`(self, value)	Sets the current progress
`startProgress`(self, begin, end, label)

endProgress(self) → None#: Ends the progress display

getDefaults(self) → Param#: Returns the default parameters

getLogType(self) → int#: Returns the type of progress log being used

getName(self) → bytes | str | String#: Returns the name

getParameters(self) → Param#: Returns the parameters

getProductName(self) → bytes | str | String#

getSubsections(self) → List[bytes]#

nextProgress(self) → None#: Increment progress by 1 (according to range begin-end)

registerChildren(self) → None#: Register all derived classes here

run(self, input_maps: List[ConsensusMap], result_map: ConsensusMap) → None#

setLogType(self, in_0: int) → None#: Sets the progress log that should be used. The default type is NONE!

setName(self, in_0: bytes | str | String) → None#: Sets the name

setParameters(self, param: Param) → None#: Sets the parameters

setProgress(self, value: int) → None#: Sets the current progress

startProgress(self, begin: int, end: int, label: bytes | str | String) → None#