IdXMLFile#

class pyopenms.IdXMLFile#

Bases: object

Cython implementation of _IdXMLFile

Original C++ documentation is available here

__init__(self) → None#

Used to load and store idXML files

Methods

__init__(self)

Used to load and store idXML files

load(self, filename, protein_ids, peptide_ids)

Loads the identifications of an idXML file without identifier

store

Overload:
load(self, filename: bytes | str | String, protein_ids: List[ProteinIdentification], peptide_ids: List[PeptideIdentification]) → None#

Loads the identifications of an idXML file without identifier

store()#

Overload:

store(self, filename: bytes | str | String, protein_ids: List[ProteinIdentification], peptide_ids: List[PeptideIdentification], document_id: bytes | str | String) → None

Stores the data in an idXML file

Overload:

store(self, filename: bytes | str | String, protein_ids: List[ProteinIdentification], peptide_ids: List[PeptideIdentification]) → None